Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Gm16026-204ENSMUST00000162652 683 ntBASIC13.87□□□□□ -0.19
Clrn1Q8K445 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.87□□□□□ -0.19
Clrn1Q8K445 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.86□□□□□ -0.19
Clrn1Q8K445 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.86□□□□□ -0.19
Clrn1Q8K445 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clrn1Q8K445 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.85□□□□□ -0.19
Clrn1Q8K445 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clrn1Q8K445 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.85□□□□□ -0.19
Clrn1Q8K445 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.84□□□□□ -0.19
Clrn1Q8K445 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clrn1Q8K445 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.84□□□□□ -0.19
Clrn1Q8K445 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms