Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Mir5131-201ENSMUST00000175426 93 ntBASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Gm27628-201ENSMUST00000184911 107 ntBASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cchcr1Q8K2I2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cchcr1Q8K2I2 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cchcr1Q8K2I2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cchcr1Q8K2I2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cchcr1Q8K2I2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms