Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.54■□□□□ 0.24
Syne4Q8CII8 BC001981-202ENSMUST00000191393 1545 ntBASIC16.54■□□□□ 0.24
Syne4Q8CII8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Syne4Q8CII8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.53■□□□□ 0.24
Syne4Q8CII8 Gm5354-201ENSMUST00000182417 973 ntBASIC16.53■□□□□ 0.24
Syne4Q8CII8 Gm27701-201ENSMUST00000184498 110 ntBASIC16.53■□□□□ 0.24
Syne4Q8CII8 Gm27892-201ENSMUST00000185017 106 ntBASIC16.53■□□□□ 0.24
Syne4Q8CII8 Mir6420-201ENSMUST00000185032 102 ntBASIC16.53■□□□□ 0.24
Syne4Q8CII8 Gm28911-201ENSMUST00000188837 117 ntBASIC16.53■□□□□ 0.24
Syne4Q8CII8 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.53■□□□□ 0.24
Syne4Q8CII8 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.53■□□□□ 0.24
Syne4Q8CII8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Syne4Q8CII8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Syne4Q8CII8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syne4Q8CII8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syne4Q8CII8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syne4Q8CII8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Syne4Q8CII8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syne4Q8CII8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syne4Q8CII8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syne4Q8CII8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Syne4Q8CII8 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.52■□□□□ 0.24
Syne4Q8CII8 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.52■□□□□ 0.24
Syne4Q8CII8 Gm4984-201ENSMUST00000115987 360 ntBASIC16.52■□□□□ 0.24
Syne4Q8CII8 Gm12341-201ENSMUST00000119724 503 ntBASIC16.52■□□□□ 0.24
Syne4Q8CII8 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.52■□□□□ 0.24
Syne4Q8CII8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syne4Q8CII8 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.52■□□□□ 0.24
Syne4Q8CII8 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.52■□□□□ 0.24
Syne4Q8CII8 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Syne4Q8CII8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Syne4Q8CII8 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syne4Q8CII8 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syne4Q8CII8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syne4Q8CII8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Syne4Q8CII8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Syne4Q8CII8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Syne4Q8CII8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Syne4Q8CII8 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Syne4Q8CII8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Syne4Q8CII8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Syne4Q8CII8 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.52■□□□□ 0.23
Syne4Q8CII8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Syne4Q8CII8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Syne4Q8CII8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syne4Q8CII8 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.51■□□□□ 0.23
Syne4Q8CII8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syne4Q8CII8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Syne4Q8CII8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Syne4Q8CII8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syne4Q8CII8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.51■□□□□ 0.23
Syne4Q8CII8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.51■□□□□ 0.23
Syne4Q8CII8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.51■□□□□ 0.23
Syne4Q8CII8 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.51■□□□□ 0.23
Syne4Q8CII8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syne4Q8CII8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Syne4Q8CII8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Syne4Q8CII8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syne4Q8CII8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syne4Q8CII8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Syne4Q8CII8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Syne4Q8CII8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Syne4Q8CII8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Syne4Q8CII8 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms