Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.02■□□□□ -0
CopaQ8CIE6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CopaQ8CIE6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CopaQ8CIE6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CopaQ8CIE6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CopaQ8CIE6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CopaQ8CIE6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CopaQ8CIE6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CopaQ8CIE6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CopaQ8CIE6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CopaQ8CIE6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CopaQ8CIE6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.01□□□□□ -0.01
CopaQ8CIE6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.01□□□□□ -0.01
CopaQ8CIE6 Thap2-203ENSMUST00000218989 527 ntBASIC15.01□□□□□ -0.01
CopaQ8CIE6 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CopaQ8CIE6 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.01□□□□□ -0.01
CopaQ8CIE6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CopaQ8CIE6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CopaQ8CIE6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15□□□□□ -0.01
CopaQ8CIE6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15□□□□□ -0.01
CopaQ8CIE6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CopaQ8CIE6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CopaQ8CIE6 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15□□□□□ -0.01
CopaQ8CIE6 Mir1895-201ENSMUST00000122615 79 ntBASIC15□□□□□ -0.01
CopaQ8CIE6 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CopaQ8CIE6 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15□□□□□ -0.01
CopaQ8CIE6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Gm45612-201ENSMUST00000211320 160 ntBASIC15□□□□□ -0.01
CopaQ8CIE6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15□□□□□ -0.01
CopaQ8CIE6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15□□□□□ -0.01
CopaQ8CIE6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15□□□□□ -0.01
CopaQ8CIE6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.99□□□□□ -0.01
CopaQ8CIE6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Gm14701-201ENSMUST00000117156 348 ntBASIC14.99□□□□□ -0.01
CopaQ8CIE6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Gm11025-201ENSMUST00000140773 466 ntBASIC14.99□□□□□ -0.01
CopaQ8CIE6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Gm8396-201ENSMUST00000057361 823 ntBASIC14.99□□□□□ -0.01
CopaQ8CIE6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CopaQ8CIE6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms