Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sox30Q8CGW4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox30Q8CGW4 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox30Q8CGW4 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.07■□□□□ 0.16
Sox30Q8CGW4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox30Q8CGW4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.07■□□□□ 0.16
Sox30Q8CGW4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sox30Q8CGW4 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox30Q8CGW4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox30Q8CGW4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox30Q8CGW4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox30Q8CGW4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sox30Q8CGW4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Gm16026-204ENSMUST00000162652 683 ntBASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Gm43347-201ENSMUST00000200226 580 ntBASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox30Q8CGW4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Gm37230-201ENSMUST00000194491 818 ntBASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Gm6376-201ENSMUST00000209407 580 ntBASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 AV026068-213ENSMUST00000223675 1171 ntBASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox30Q8CGW4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Gm2420-202ENSMUST00000202224 2249 ntBASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sox30Q8CGW4 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms