Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShfQ8CG80 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShfQ8CG80 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShfQ8CG80 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.12□□□□□ -0.31
ShfQ8CG80 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShfQ8CG80 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ShfQ8CG80 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.12□□□□□ -0.31
ShfQ8CG80 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShfQ8CG80 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShfQ8CG80 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShfQ8CG80 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ShfQ8CG80 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShfQ8CG80 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShfQ8CG80 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
ShfQ8CG80 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ShfQ8CG80 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShfQ8CG80 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
ShfQ8CG80 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShfQ8CG80 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShfQ8CG80 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ShfQ8CG80 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ShfQ8CG80 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
ShfQ8CG80 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ShfQ8CG80 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.11□□□□□ -0.31
ShfQ8CG80 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.11□□□□□ -0.31
ShfQ8CG80 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ShfQ8CG80 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ShfQ8CG80 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 AV026068-213ENSMUST00000223675 1171 ntBASIC13.11□□□□□ -0.31
ShfQ8CG80 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.11□□□□□ -0.31
ShfQ8CG80 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.11□□□□□ -0.31
ShfQ8CG80 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
ShfQ8CG80 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ShfQ8CG80 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ShfQ8CG80 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.1□□□□□ -0.31
ShfQ8CG80 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.1□□□□□ -0.31
ShfQ8CG80 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Gm14042-201ENSMUST00000120139 833 ntBASIC13.1□□□□□ -0.31
ShfQ8CG80 Gm7862-201ENSMUST00000121461 292 ntBASIC13.1□□□□□ -0.31
ShfQ8CG80 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.1□□□□□ -0.31
ShfQ8CG80 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.1□□□□□ -0.31
ShfQ8CG80 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.1□□□□□ -0.31
ShfQ8CG80 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
ShfQ8CG80 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.1□□□□□ -0.31
ShfQ8CG80 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.1□□□□□ -0.31
ShfQ8CG80 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.1□□□□□ -0.31
ShfQ8CG80 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.1□□□□□ -0.31
ShfQ8CG80 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.1□□□□□ -0.31
ShfQ8CG80 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ShfQ8CG80 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
ShfQ8CG80 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ShfQ8CG80 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms