Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smc4Q8CG47 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc4Q8CG47 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.09■□□□□ 0.49
Smc4Q8CG47 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Gm37277-201ENSMUST00000194052 1111 ntBASIC18.09■□□□□ 0.49
Smc4Q8CG47 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc4Q8CG47 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smc4Q8CG47 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Smc4Q8CG47 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Smc4Q8CG47 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smc4Q8CG47 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smc4Q8CG47 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Smc4Q8CG47 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smc4Q8CG47 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Smc4Q8CG47 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.08■□□□□ 0.48
Smc4Q8CG47 Gm13823-201ENSMUST00000119930 345 ntBASIC18.08■□□□□ 0.48
Smc4Q8CG47 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smc4Q8CG47 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Smc4Q8CG47 Gm17837-201ENSMUST00000186435 985 ntBASIC18.08■□□□□ 0.48
Smc4Q8CG47 Gm28630-201ENSMUST00000187806 498 ntBASIC18.08■□□□□ 0.48
Smc4Q8CG47 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Smc4Q8CG47 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc4Q8CG47 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Smc4Q8CG47 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.08■□□□□ 0.48
Smc4Q8CG47 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Smc4Q8CG47 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Smc4Q8CG47 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC18.08■□□□□ 0.48
Smc4Q8CG47 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smc4Q8CG47 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Gm13453-201ENSMUST00000118708 357 ntBASIC18.07■□□□□ 0.48
Smc4Q8CG47 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc4Q8CG47 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Smc4Q8CG47 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.06■□□□□ 0.48
Smc4Q8CG47 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Gm5566-201ENSMUST00000116118 459 ntBASIC18.06■□□□□ 0.48
Smc4Q8CG47 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.06■□□□□ 0.48
Smc4Q8CG47 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smc4Q8CG47 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Smc4Q8CG47 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms