Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc38Q8CDN8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc38Q8CDN8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ccdc38Q8CDN8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ccdc38Q8CDN8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc38Q8CDN8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc38Q8CDN8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc38Q8CDN8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ccdc38Q8CDN8 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Gm42829-201ENSMUST00000198417 2585 ntBASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ccdc38Q8CDN8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Gm13464-201ENSMUST00000119418 935 ntBASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ccdc38Q8CDN8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Gm2651-201ENSMUST00000203560 838 ntBASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ccdc38Q8CDN8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms