Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Lysmd4Q8CC84 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Lysmd4Q8CC84 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lysmd4Q8CC84 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lysmd4Q8CC84 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lysmd4Q8CC84 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms