Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Mir6392-201ENSMUST00000184924 108 ntBASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Col6a6Q8C6K9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Gm12091-201ENSMUST00000146791 830 ntBASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Mir125a-201ENSMUST00000083545 68 ntBASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 BC001981-202ENSMUST00000191393 1545 ntBASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Gm2451-201ENSMUST00000199447 999 ntBASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Gm10290-201ENSMUST00000200451 999 ntBASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col6a6Q8C6K9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Gm33320-201ENSMUST00000192232 530 ntBASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col6a6Q8C6K9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a6Q8C6K9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Col6a6Q8C6K9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a6Q8C6K9 Dancr-204ENSMUST00000132389 2347 ntBASIC13.21□□□□□ -0.3
Col6a6Q8C6K9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a6Q8C6K9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a6Q8C6K9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a6Q8C6K9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Col6a6Q8C6K9 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a6Q8C6K9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a6Q8C6K9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a6Q8C6K9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col6a6Q8C6K9 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col6a6Q8C6K9 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms