Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tsen54Q8C2A2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Gm15372-201ENSMUST00000120729 834 ntBASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Tsen54Q8C2A2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Gm12895-201ENSMUST00000122214 226 ntBASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Gm44454-201ENSMUST00000198541 138 ntBASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tsen54Q8C2A2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms