Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Gm9726-201ENSMUST00000180321 678 ntBASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sh3rf2Q8BZT2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Gm24543-201ENSMUST00000103867 82 ntBASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Mir7684-201ENSMUST00000183858 60 ntBASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Gm44344-201ENSMUST00000200287 129 ntBASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Sh3rf2Q8BZT2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Gm27437-201ENSMUST00000183429 107 ntBASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Gm27680-201ENSMUST00000184192 160 ntBASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Gm9182-201ENSMUST00000217829 639 ntBASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Gm9063-201ENSMUST00000223299 582 ntBASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sh3rf2Q8BZT2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh3rf2Q8BZT2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms