Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Gm46209-201ENSMUST00000217912 553 ntBASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scfd1Q8BRF7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Gm27838-201ENSMUST00000184829 128 ntBASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scfd1Q8BRF7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.73■□□□□ 0.27
Scfd1Q8BRF7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 Gm10275-202ENSMUST00000168697 495 ntBASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scfd1Q8BRF7 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms