Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Gm19164-201ENSMUST00000210667 640 ntBASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smco3Q8BQM7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Carlr-201ENSMUST00000181515 2574 ntBASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Gm43195-201ENSMUST00000200614 2332 ntBASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smco3Q8BQM7 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smco3Q8BQM7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms