Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Gm23931-201ENSMUST00000103842 109 ntBASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Gm7561-201ENSMUST00000211203 886 ntBASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 AC155258.1-201ENSMUST00000219303 253 ntBASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 AC140451.2-201ENSMUST00000228030 664 ntBASIC18.98■□□□□ 0.63
Col16a1Q8BLX7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Gm29127-201ENSMUST00000188304 517 ntBASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Gm38037-201ENSMUST00000192600 1624 ntBASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col16a1Q8BLX7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Gm8399-201ENSMUST00000082300 1117 ntBASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col16a1Q8BLX7 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
Col16a1Q8BLX7 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Gm8775-201ENSMUST00000170943 1327 ntBASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Gm17420-201ENSMUST00000164753 153 ntBASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col16a1Q8BLX7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Gm8652-201ENSMUST00000181363 964 ntBASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Gm4804-201ENSMUST00000182234 999 ntBASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Col16a1Q8BLX7 Gm37714-201ENSMUST00000194742 342 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms