Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Gm17271-201ENSMUST00000165535 355 ntBASIC15.49■□□□□ 0.07
Trpa1Q8BLA8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trpa1Q8BLA8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trpa1Q8BLA8 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trpa1Q8BLA8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trpa1Q8BLA8 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.49■□□□□ 0.07
Trpa1Q8BLA8 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trpa1Q8BLA8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trpa1Q8BLA8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trpa1Q8BLA8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trpa1Q8BLA8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.49■□□□□ 0.07
Trpa1Q8BLA8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trpa1Q8BLA8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trpa1Q8BLA8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trpa1Q8BLA8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Gm27301-201ENSMUST00000184012 127 ntBASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trpa1Q8BLA8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Gm27702-201ENSMUST00000184512 56 ntBASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trpa1Q8BLA8 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trpa1Q8BLA8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Trpa1Q8BLA8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms