Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SynbQ8BI41 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SynbQ8BI41 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SynbQ8BI41 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SynbQ8BI41 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.08□□□□□ -0.16
SynbQ8BI41 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.08□□□□□ -0.16
SynbQ8BI41 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.08□□□□□ -0.16
SynbQ8BI41 Gm10253-201ENSMUST00000194270 940 ntBASIC14.08□□□□□ -0.16
SynbQ8BI41 Gm18057-201ENSMUST00000208220 503 ntBASIC14.08□□□□□ -0.16
SynbQ8BI41 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.08□□□□□ -0.16
SynbQ8BI41 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SynbQ8BI41 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.08□□□□□ -0.16
SynbQ8BI41 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SynbQ8BI41 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SynbQ8BI41 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
SynbQ8BI41 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SynbQ8BI41 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SynbQ8BI41 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SynbQ8BI41 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.07□□□□□ -0.16
SynbQ8BI41 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.07□□□□□ -0.16
SynbQ8BI41 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.07□□□□□ -0.16
SynbQ8BI41 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Gm16198-201ENSMUST00000118766 670 ntBASIC14.07□□□□□ -0.16
SynbQ8BI41 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SynbQ8BI41 Gm7774-201ENSMUST00000200064 533 ntBASIC14.07□□□□□ -0.16
SynbQ8BI41 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SynbQ8BI41 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.07□□□□□ -0.16
SynbQ8BI41 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SynbQ8BI41 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
SynbQ8BI41 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SynbQ8BI41 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
SynbQ8BI41 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.06□□□□□ -0.16
SynbQ8BI41 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynbQ8BI41 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynbQ8BI41 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynbQ8BI41 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynbQ8BI41 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SynbQ8BI41 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynbQ8BI41 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynbQ8BI41 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
SynbQ8BI41 Gm25287-201ENSMUST00000103846 110 ntBASIC14.06□□□□□ -0.16
SynbQ8BI41 Gm22918-201ENSMUST00000103855 110 ntBASIC14.06□□□□□ -0.16
SynbQ8BI41 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynbQ8BI41 Gm9385-201ENSMUST00000117563 472 ntBASIC14.06□□□□□ -0.16
SynbQ8BI41 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.06□□□□□ -0.16
SynbQ8BI41 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
SynbQ8BI41 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.06□□□□□ -0.16
SynbQ8BI41 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SynbQ8BI41 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.06□□□□□ -0.16
SynbQ8BI41 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.06□□□□□ -0.16
SynbQ8BI41 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynbQ8BI41 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynbQ8BI41 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SynbQ8BI41 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynbQ8BI41 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SynbQ8BI41 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynbQ8BI41 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SynbQ8BI41 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SynbQ8BI41 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms