Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Gm24496-201ENSMUST00000178287 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm25649-201ENSMUST00000178476 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm25548-201ENSMUST00000178681 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm23147-201ENSMUST00000178841 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm26095-201ENSMUST00000179270 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm22171-201ENSMUST00000179283 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm23936-201ENSMUST00000179354 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm22619-201ENSMUST00000179516 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm25255-201ENSMUST00000179579 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm24755-201ENSMUST00000179691 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm26506-201ENSMUST00000179692 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm25086-201ENSMUST00000179931 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm23243-201ENSMUST00000180047 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm24659-201ENSMUST00000180212 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm24169-201ENSMUST00000180244 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm23689-201ENSMUST00000180354 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm27359-201ENSMUST00000184153 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm27785-201ENSMUST00000184268 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm27466-201ENSMUST00000184396 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm27703-201ENSMUST00000184836 110 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Atg4dQ8BGV9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Gm5312-201ENSMUST00000203728 547 ntBASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Atg4dQ8BGV9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Gm23547-201ENSMUST00000158210 271 ntBASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Gm5867-201ENSMUST00000063197 592 ntBASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Atg4dQ8BGV9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms