Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Skida1Q80YR3 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Skida1Q80YR3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.16■□□□□ 0.02
Skida1Q80YR3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Skida1Q80YR3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Skida1Q80YR3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Skida1Q80YR3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Skida1Q80YR3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.16■□□□□ 0.02
Skida1Q80YR3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Skida1Q80YR3 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Gm14900-201ENSMUST00000120304 733 ntBASIC15.15■□□□□ 0.02
Skida1Q80YR3 Gm14840-201ENSMUST00000122135 594 ntBASIC15.15■□□□□ 0.02
Skida1Q80YR3 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Gm37727-201ENSMUST00000191637 819 ntBASIC15.15■□□□□ 0.02
Skida1Q80YR3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.15■□□□□ 0.02
Skida1Q80YR3 Gm42454-201ENSMUST00000196805 1181 ntBASIC15.15■□□□□ 0.02
Skida1Q80YR3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Gm43036-201ENSMUST00000200594 373 ntBASIC15.15■□□□□ 0.02
Skida1Q80YR3 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC15.15■□□□□ 0.02
Skida1Q80YR3 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC15.15■□□□□ 0.02
Skida1Q80YR3 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.15■□□□□ 0.02
Skida1Q80YR3 4930408K08Rik-201ENSMUST00000195936 1436 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Skida1Q80YR3 Gm7416-201ENSMUST00000117448 1487 ntBASIC15.14■□□□□ 0.01
Skida1Q80YR3 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Rab3c-202ENSMUST00000223922 2398 ntBASIC15.14■□□□□ 0.01
Skida1Q80YR3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Gm42968-201ENSMUST00000198578 1372 ntBASIC15.14■□□□□ 0.01
Skida1Q80YR3 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.14■□□□□ 0.01
Skida1Q80YR3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Gm12497-201ENSMUST00000138778 237 ntBASIC15.14■□□□□ 0.01
Skida1Q80YR3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Gm2541-201ENSMUST00000161209 711 ntBASIC15.14■□□□□ 0.01
Skida1Q80YR3 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Gm37072-201ENSMUST00000194570 837 ntBASIC15.14■□□□□ 0.01
Skida1Q80YR3 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC15.14■□□□□ 0.01
Skida1Q80YR3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Skida1Q80YR3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Skida1Q80YR3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Skida1Q80YR3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Skida1Q80YR3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Skida1Q80YR3 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Skida1Q80YR3 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Skida1Q80YR3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms