Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bQ80YF6 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bQ80YF6 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Gm11780-201ENSMUST00000136880 516 ntBASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.42□□□□□ -0.42
Upk3bQ80YF6 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bQ80YF6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Upk3bQ80YF6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms