Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrrtm4Q80XG9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Lrrtm4Q80XG9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrrtm4Q80XG9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrrtm4Q80XG9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrrtm4Q80XG9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lrrtm4Q80XG9 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.32□□□□□ -0.12
Lrrtm4Q80XG9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrrtm4Q80XG9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrrtm4Q80XG9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Lrrtm4Q80XG9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrrtm4Q80XG9 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.32□□□□□ -0.12
Lrrtm4Q80XG9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrrtm4Q80XG9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrrtm4Q80XG9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Lrrtm4Q80XG9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Mir449b-201ENSMUST00000104833 80 ntBASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Gm9824-201ENSMUST00000178707 561 ntBASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lrrtm4Q80XG9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Gm9182-201ENSMUST00000217829 639 ntBASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lrrtm4Q80XG9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lrrtm4Q80XG9 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.29□□□□□ -0.12
Lrrtm4Q80XG9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lrrtm4Q80XG9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lrrtm4Q80XG9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms