Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Srrm3Q80WV7 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.32■□□□□ 0.04
Srrm3Q80WV7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
Srrm3Q80WV7 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Srrm3Q80WV7 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Srrm3Q80WV7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Srrm3Q80WV7 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.32■□□□□ 0.04
Srrm3Q80WV7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.32■□□□□ 0.04
Srrm3Q80WV7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Srrm3Q80WV7 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.32■□□□□ 0.04
Srrm3Q80WV7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Srrm3Q80WV7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Srrm3Q80WV7 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Srrm3Q80WV7 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.32■□□□□ 0.04
Srrm3Q80WV7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Srrm3Q80WV7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Srrm3Q80WV7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Srrm3Q80WV7 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.32■□□□□ 0.04
Srrm3Q80WV7 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Srrm3Q80WV7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.31■□□□□ 0.04
Srrm3Q80WV7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Srrm3Q80WV7 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Srrm3Q80WV7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Srrm3Q80WV7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srrm3Q80WV7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Srrm3Q80WV7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srrm3Q80WV7 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms