Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim36Q80WG7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim36Q80WG7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim36Q80WG7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim36Q80WG7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim36Q80WG7 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim36Q80WG7 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.21□□□□□ -0.13
Trim36Q80WG7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim36Q80WG7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim36Q80WG7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Trim36Q80WG7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim36Q80WG7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim36Q80WG7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim36Q80WG7 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim36Q80WG7 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim36Q80WG7 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim36Q80WG7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Gm15467-201ENSMUST00000120582 445 ntBASIC14.2□□□□□ -0.14
Trim36Q80WG7 Gm12260-201ENSMUST00000122447 411 ntBASIC14.2□□□□□ -0.14
Trim36Q80WG7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.2□□□□□ -0.14
Trim36Q80WG7 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.2□□□□□ -0.14
Trim36Q80WG7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim36Q80WG7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Gm15358-201ENSMUST00000119249 520 ntBASIC14.19□□□□□ -0.14
Trim36Q80WG7 Gm14140-201ENSMUST00000119999 995 ntBASIC14.19□□□□□ -0.14
Trim36Q80WG7 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim36Q80WG7 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim36Q80WG7 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim36Q80WG7 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.18□□□□□ -0.14
Trim36Q80WG7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Trim36Q80WG7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim36Q80WG7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim36Q80WG7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim36Q80WG7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim36Q80WG7 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim36Q80WG7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Trim36Q80WG7 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim36Q80WG7 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim36Q80WG7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.18□□□□□ -0.14
Trim36Q80WG7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim36Q80WG7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim36Q80WG7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim36Q80WG7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trim36Q80WG7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms