Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Prpf40bQ80W14 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Prpf40bQ80W14 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.3
Prpf40bQ80W14 Syt7-204ENSMUST00000223586 1344 ntBASIC16.96■□□□□ 0.3
Prpf40bQ80W14 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Prpf40bQ80W14 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf40bQ80W14 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf40bQ80W14 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Prpf40bQ80W14 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Prpf40bQ80W14 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf40bQ80W14 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.94■□□□□ 0.3
Prpf40bQ80W14 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.94■□□□□ 0.3
Prpf40bQ80W14 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.94■□□□□ 0.3
Prpf40bQ80W14 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.94■□□□□ 0.3
Prpf40bQ80W14 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf40bQ80W14 Gm38225-201ENSMUST00000194001 393 ntBASIC16.94■□□□□ 0.3
Prpf40bQ80W14 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.94■□□□□ 0.3
Prpf40bQ80W14 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Prpf40bQ80W14 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.94■□□□□ 0.3
Prpf40bQ80W14 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf40bQ80W14 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf40bQ80W14 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf40bQ80W14 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf40bQ80W14 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf40bQ80W14 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Prpf40bQ80W14 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Gm11543-201ENSMUST00000120758 370 ntBASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Gm9063-201ENSMUST00000223299 582 ntBASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.93■□□□□ 0.3
Prpf40bQ80W14 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Gm18737-201ENSMUST00000173594 937 ntBASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Gm25144-201ENSMUST00000179561 110 ntBASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Gm25352-201ENSMUST00000179815 110 ntBASIC16.92■□□□□ 0.3
Prpf40bQ80W14 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Prpf40bQ80W14 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms