Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim62Q80V85 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim62Q80V85 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim62Q80V85 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim62Q80V85 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Trim62Q80V85 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim62Q80V85 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.2■□□□□ 0.02
Trim62Q80V85 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim62Q80V85 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.19■□□□□ 0.02
Trim62Q80V85 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trim62Q80V85 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim62Q80V85 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim62Q80V85 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.19■□□□□ 0.02
Trim62Q80V85 Gm9824-201ENSMUST00000178707 561 ntBASIC15.19■□□□□ 0.02
Trim62Q80V85 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trim62Q80V85 Gm5312-201ENSMUST00000203728 547 ntBASIC15.19■□□□□ 0.02
Trim62Q80V85 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim62Q80V85 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.19■□□□□ 0.02
Trim62Q80V85 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim62Q80V85 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim62Q80V85 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim62Q80V85 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim62Q80V85 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trim62Q80V85 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim62Q80V85 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.19■□□□□ 0.02
Trim62Q80V85 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm22065-201ENSMUST00000103753 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm22066-201ENSMUST00000103761 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm24932-201ENSMUST00000103763 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm24115-201ENSMUST00000103799 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm22190-201ENSMUST00000103827 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm22191-201ENSMUST00000103831 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm24721-201ENSMUST00000103849 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm28018-201ENSMUST00000103869 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm26399-201ENSMUST00000103937 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trim62Q80V85 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim62Q80V85 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm25349-201ENSMUST00000177728 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm23616-201ENSMUST00000177797 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm25871-201ENSMUST00000177816 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm24752-201ENSMUST00000178240 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm24496-201ENSMUST00000178287 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm25649-201ENSMUST00000178476 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm25548-201ENSMUST00000178681 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm23147-201ENSMUST00000178841 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm26095-201ENSMUST00000179270 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm22171-201ENSMUST00000179283 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm23936-201ENSMUST00000179354 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm22619-201ENSMUST00000179516 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm25255-201ENSMUST00000179579 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm24755-201ENSMUST00000179691 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm26506-201ENSMUST00000179692 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm25086-201ENSMUST00000179931 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm23243-201ENSMUST00000180047 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm24659-201ENSMUST00000180212 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm24169-201ENSMUST00000180244 110 ntBASIC15.18■□□□□ 0.02
Trim62Q80V85 Gm23689-201ENSMUST00000180354 110 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms