Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
Rpap1Q80TE0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpap1Q80TE0 Gm21470-201ENSMUST00000187680 696 ntBASIC22.52■■□□□ 1.2
Rpap1Q80TE0 Gm2495-201ENSMUST00000191160 466 ntBASIC22.52■■□□□ 1.2
Rpap1Q80TE0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC22.52■■□□□ 1.2
Rpap1Q80TE0 Gm18307-201ENSMUST00000206864 949 ntBASIC22.52■■□□□ 1.2
Rpap1Q80TE0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpap1Q80TE0 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpap1Q80TE0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpap1Q80TE0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpap1Q80TE0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC22.52■■□□□ 1.2
Rpap1Q80TE0 Gm42690-201ENSMUST00000197921 1836 ntBASIC22.52■■□□□ 1.19
Rpap1Q80TE0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Gm6283-201ENSMUST00000182369 1000 ntBASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpap1Q80TE0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpap1Q80TE0 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC22.5■■□□□ 1.19
Rpap1Q80TE0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpap1Q80TE0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC22.5■■□□□ 1.19
Rpap1Q80TE0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC22.5■■□□□ 1.19
Rpap1Q80TE0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpap1Q80TE0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC22.5■■□□□ 1.19
Rpap1Q80TE0 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpap1Q80TE0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Rpap1Q80TE0 Gm17795-201ENSMUST00000214505 757 ntBASIC22.5■■□□□ 1.19
Rpap1Q80TE0 AC156560.2-201ENSMUST00000221232 264 ntBASIC22.5■■□□□ 1.19
Rpap1Q80TE0 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rpap1Q80TE0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpap1Q80TE0 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rpap1Q80TE0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpap1Q80TE0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpap1Q80TE0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpap1Q80TE0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Rpap1Q80TE0 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Gm15240-201ENSMUST00000118156 720 ntBASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Gm8062-201ENSMUST00000139696 444 ntBASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Gm44608-201ENSMUST00000206827 855 ntBASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Prob1-201ENSMUST00000097619 3021 ntBASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpap1Q80TE0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC22.48■■□□□ 1.19
Rpap1Q80TE0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpap1Q80TE0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms