Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm2423-201ENSMUST00000074863 733 ntBASIC16.07■□□□□ 0.16
Ush1gQ80T11 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Ush1gQ80T11 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ush1gQ80T11 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.06■□□□□ 0.16
Ush1gQ80T11 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.06■□□□□ 0.16
Ush1gQ80T11 Gm7730-201ENSMUST00000212486 454 ntBASIC16.06■□□□□ 0.16
Ush1gQ80T11 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ush1gQ80T11 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.05■□□□□ 0.16
Ush1gQ80T11 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.05■□□□□ 0.16
Ush1gQ80T11 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ush1gQ80T11 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.04■□□□□ 0.16
Ush1gQ80T11 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.04■□□□□ 0.16
Ush1gQ80T11 Gm15483-201ENSMUST00000120338 456 ntBASIC16.04■□□□□ 0.16
Ush1gQ80T11 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ush1gQ80T11 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms