Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pif1Q80SX8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.58□□□□□ -0.24
Pif1Q80SX8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Pif1Q80SX8 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.57□□□□□ -0.24
Pif1Q80SX8 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.57□□□□□ -0.24
Pif1Q80SX8 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.57□□□□□ -0.24
Pif1Q80SX8 Gm2423-201ENSMUST00000074863 733 ntBASIC13.57□□□□□ -0.24
Pif1Q80SX8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Pif1Q80SX8 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pif1Q80SX8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 BC043934-202ENSMUST00000185694 2356 ntBASIC13.56□□□□□ -0.24
Pif1Q80SX8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Gm28630-201ENSMUST00000187806 498 ntBASIC13.56□□□□□ -0.24
Pif1Q80SX8 Gm18766-201ENSMUST00000189811 808 ntBASIC13.56□□□□□ -0.24
Pif1Q80SX8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pif1Q80SX8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pif1Q80SX8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms