Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Gm10175-202ENSMUST00000208752 441 ntBASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rfx4Q7TNK1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Gm15165-201ENSMUST00000118140 502 ntBASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rfx4Q7TNK1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.11□□□□□ -0.15
Rfx4Q7TNK1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Gm25016-201ENSMUST00000158399 131 ntBASIC14.1□□□□□ -0.15
Rfx4Q7TNK1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms