Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.31□□□□□ -0.12
Scn4bQ7M729 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Scn4bQ7M729 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Scn4bQ7M729 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.31□□□□□ -0.12
Scn4bQ7M729 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn4bQ7M729 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.3□□□□□ -0.12
Scn4bQ7M729 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.3□□□□□ -0.12
Scn4bQ7M729 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Gm12260-201ENSMUST00000122447 411 ntBASIC14.3□□□□□ -0.12
Scn4bQ7M729 Gm16026-204ENSMUST00000162652 683 ntBASIC14.3□□□□□ -0.12
Scn4bQ7M729 Gm17968-201ENSMUST00000194902 784 ntBASIC14.3□□□□□ -0.12
Scn4bQ7M729 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn4bQ7M729 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.29□□□□□ -0.12
Scn4bQ7M729 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Gm13464-201ENSMUST00000119418 935 ntBASIC14.29□□□□□ -0.12
Scn4bQ7M729 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Gm23547-201ENSMUST00000158210 271 ntBASIC14.29□□□□□ -0.12
Scn4bQ7M729 Gm9726-201ENSMUST00000180321 678 ntBASIC14.29□□□□□ -0.12
Scn4bQ7M729 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Gm27301-201ENSMUST00000184012 127 ntBASIC14.29□□□□□ -0.12
Scn4bQ7M729 Gm27525-201ENSMUST00000184465 107 ntBASIC14.29□□□□□ -0.12
Scn4bQ7M729 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn4bQ7M729 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms