Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Gm42997-202ENSMUST00000200321 985 ntBASIC12.35□□□□□ -0.43
Rif1Q6PR54 Gm9368-201ENSMUST00000219348 831 ntBASIC12.35□□□□□ -0.43
Rif1Q6PR54 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rif1Q6PR54 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.34□□□□□ -0.43
Rif1Q6PR54 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.34□□□□□ -0.43
Rif1Q6PR54 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rif1Q6PR54 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rif1Q6PR54 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.33□□□□□ -0.43
Rif1Q6PR54 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
Rif1Q6PR54 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.33□□□□□ -0.43
Rif1Q6PR54 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.33□□□□□ -0.43
Rif1Q6PR54 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rif1Q6PR54 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rif1Q6PR54 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rif1Q6PR54 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.33□□□□□ -0.44
Rif1Q6PR54 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.33□□□□□ -0.44
Rif1Q6PR54 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rif1Q6PR54 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.32□□□□□ -0.44
Rif1Q6PR54 Gm5279-201ENSMUST00000199575 745 ntBASIC12.32□□□□□ -0.44
Rif1Q6PR54 Gm8959-201ENSMUST00000213150 571 ntBASIC12.32□□□□□ -0.44
Rif1Q6PR54 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rif1Q6PR54 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms