Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scaf4Q6PFF0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Gm7284-201ENSMUST00000131667 944 ntBASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scaf4Q6PFF0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Gm9682-201ENSMUST00000197505 556 ntBASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scaf4Q6PFF0 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Gm4535-201ENSMUST00000182274 558 ntBASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Gm10355-201ENSMUST00000097146 517 ntBASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.48□□□□□ -0.09
Scaf4Q6PFF0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms