Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smarcc2Q6PDG5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Gm23935-201ENSMUST00000102303 57 ntBASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Gm24270-201ENSMUST00000102326 57 ntBASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Gm16198-201ENSMUST00000118766 670 ntBASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Gm24245-201ENSMUST00000157318 57 ntBASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Gm10676-201ENSMUST00000098778 3221 ntBASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smarcc2Q6PDG5 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Gm13464-201ENSMUST00000119418 935 ntBASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Gm10154-201ENSMUST00000084445 354 ntBASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcc2Q6PDG5 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcc2Q6PDG5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms