Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Gm13464-201ENSMUST00000119418 935 ntBASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Gm17968-201ENSMUST00000194902 784 ntBASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Psmb5-202ENSMUST00000227257 622 ntBASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Gm10154-201ENSMUST00000084445 354 ntBASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Sp140Q6NSQ5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Gm8749-201ENSMUST00000117737 331 ntBASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Gm2272-201ENSMUST00000194903 582 ntBASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Thap2-203ENSMUST00000218989 527 ntBASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sp140Q6NSQ5 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Gm9726-201ENSMUST00000180321 678 ntBASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sp140Q6NSQ5 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms