Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm27663-201ENSMUST00000184839 110 ntBASIC18.56■□□□□ 0.56
Clcn1Q64347 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.56■□□□□ 0.56
Clcn1Q64347 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn1Q64347 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC18.56■□□□□ 0.56
Clcn1Q64347 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.56■□□□□ 0.56
Clcn1Q64347 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Clcn1Q64347 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Clcn1Q64347 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn1Q64347 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn1Q64347 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Clcn1Q64347 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
Clcn1Q64347 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn1Q64347 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn1Q64347 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Clcn1Q64347 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Clcn1Q64347 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC18.55■□□□□ 0.56
Clcn1Q64347 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn1Q64347 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn1Q64347 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.55■□□□□ 0.56
Clcn1Q64347 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.55■□□□□ 0.56
Clcn1Q64347 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.55■□□□□ 0.56
Clcn1Q64347 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Clcn1Q64347 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn1Q64347 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn1Q64347 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.55■□□□□ 0.56
Clcn1Q64347 Gm46209-201ENSMUST00000217912 553 ntBASIC18.55■□□□□ 0.56
Clcn1Q64347 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.55■□□□□ 0.56
Clcn1Q64347 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn1Q64347 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn1Q64347 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn1Q64347 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn1Q64347 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn1Q64347 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn1Q64347 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn1Q64347 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn1Q64347 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn1Q64347 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn1Q64347 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn1Q64347 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn1Q64347 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn1Q64347 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn1Q64347 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn1Q64347 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn1Q64347 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn1Q64347 Gm12138-201ENSMUST00000122180 951 ntBASIC18.54■□□□□ 0.56
Clcn1Q64347 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Clcn1Q64347 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Clcn1Q64347 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.54■□□□□ 0.56
Clcn1Q64347 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.54■□□□□ 0.56
Clcn1Q64347 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.54■□□□□ 0.56
Clcn1Q64347 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn1Q64347 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn1Q64347 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn1Q64347 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn1Q64347 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn1Q64347 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.54■□□□□ 0.56
Clcn1Q64347 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn1Q64347 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Clcn1Q64347 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn1Q64347 Gm10676-201ENSMUST00000098778 3221 ntBASIC18.53■□□□□ 0.56
Clcn1Q64347 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.53■□□□□ 0.56
Clcn1Q64347 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn1Q64347 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn1Q64347 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Clcn1Q64347 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Clcn1Q64347 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn1Q64347 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.53■□□□□ 0.56
Clcn1Q64347 Gm23984-201ENSMUST00000157139 203 ntBASIC18.53■□□□□ 0.56
Clcn1Q64347 Gm19891-201ENSMUST00000189771 303 ntBASIC18.53■□□□□ 0.56
Clcn1Q64347 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn1Q64347 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC18.53■□□□□ 0.56
Clcn1Q64347 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.53■□□□□ 0.56
Clcn1Q64347 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Clcn1Q64347 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn1Q64347 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Clcn1Q64347 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn1Q64347 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Clcn1Q64347 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn1Q64347 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn1Q64347 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn1Q64347 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn1Q64347 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn1Q64347 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Clcn1Q64347 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn1Q64347 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn1Q64347 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn1Q64347 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Clcn1Q64347 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn1Q64347 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn1Q64347 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn1Q64347 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn1Q64347 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm29310-201ENSMUST00000185468 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm21825-201ENSMUST00000185728 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm29109-201ENSMUST00000185895 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm21896-201ENSMUST00000186520 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm21873-201ENSMUST00000186728 696 ntBASIC18.52■□□□□ 0.56
Clcn1Q64347 Gm21794-201ENSMUST00000187056 696 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms