Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trim28Q62318 Gm7390-201ENSMUST00000212452 1216 ntBASIC18.98■□□□□ 0.63
Trim28Q62318 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim28Q62318 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Trim28Q62318 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim28Q62318 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Trim28Q62318 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim28Q62318 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Trim28Q62318 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trim28Q62318 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim28Q62318 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim28Q62318 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim28Q62318 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim28Q62318 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim28Q62318 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trim28Q62318 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Trim28Q62318 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim28Q62318 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim28Q62318 Gm21854-201ENSMUST00000179901 471 ntBASIC18.97■□□□□ 0.63
Trim28Q62318 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim28Q62318 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Trim28Q62318 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim28Q62318 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim28Q62318 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim28Q62318 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim28Q62318 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim28Q62318 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim28Q62318 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim28Q62318 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim28Q62318 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim28Q62318 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim28Q62318 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Trim28Q62318 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim28Q62318 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim28Q62318 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim28Q62318 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim28Q62318 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trim28Q62318 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim28Q62318 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim28Q62318 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim28Q62318 AC102291.3-201ENSMUST00000226566 405 ntBASIC18.96■□□□□ 0.63
Trim28Q62318 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim28Q62318 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim28Q62318 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim28Q62318 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.96■□□□□ 0.63
Trim28Q62318 Syt7-205ENSMUST00000224135 1557 ntBASIC18.96■□□□□ 0.63
Trim28Q62318 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Trim28Q62318 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim28Q62318 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim28Q62318 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim28Q62318 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim28Q62318 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim28Q62318 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim28Q62318 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Trim28Q62318 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim28Q62318 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim28Q62318 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim28Q62318 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim28Q62318 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim28Q62318 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim28Q62318 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim28Q62318 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC18.95■□□□□ 0.62
Trim28Q62318 Gm9522-201ENSMUST00000182394 926 ntBASIC18.95■□□□□ 0.62
Trim28Q62318 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim28Q62318 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.95■□□□□ 0.62
Trim28Q62318 Gm6218-201ENSMUST00000219812 628 ntBASIC18.95■□□□□ 0.62
Trim28Q62318 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trim28Q62318 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim28Q62318 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim28Q62318 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim28Q62318 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trim28Q62318 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim28Q62318 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim28Q62318 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim28Q62318 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim28Q62318 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trim28Q62318 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trim28Q62318 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim28Q62318 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim28Q62318 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim28Q62318 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim28Q62318 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trim28Q62318 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim28Q62318 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Trim28Q62318 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim28Q62318 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim28Q62318 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trim28Q62318 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim28Q62318 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim28Q62318 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim28Q62318 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trim28Q62318 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim28Q62318 Gm45195-201ENSMUST00000205597 1008 ntBASIC18.94■□□□□ 0.62
Trim28Q62318 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim28Q62318 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trim28Q62318 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim28Q62318 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trim28Q62318 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim28Q62318 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.62
Trim28Q62318 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms