Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Auts2-212ENSMUST00000178555 309 ntBASIC17.33■□□□□ 0.36
Ctr9Q62018 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ctr9Q62018 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctr9Q62018 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctr9Q62018 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctr9Q62018 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ctr9Q62018 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ctr9Q62018 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ctr9Q62018 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctr9Q62018 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctr9Q62018 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctr9Q62018 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctr9Q62018 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctr9Q62018 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ctr9Q62018 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ctr9Q62018 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ctr9Q62018 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.32■□□□□ 0.36
Ctr9Q62018 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.32■□□□□ 0.36
Ctr9Q62018 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ctr9Q62018 Gm22175-201ENSMUST00000175007 78 ntBASIC17.32■□□□□ 0.36
Ctr9Q62018 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.32■□□□□ 0.36
Ctr9Q62018 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.32■□□□□ 0.36
Ctr9Q62018 Gm29541-201ENSMUST00000191351 678 ntBASIC17.32■□□□□ 0.36
Ctr9Q62018 Gm2451-201ENSMUST00000199447 999 ntBASIC17.32■□□□□ 0.36
Ctr9Q62018 Gm10290-201ENSMUST00000200451 999 ntBASIC17.32■□□□□ 0.36
Ctr9Q62018 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.32■□□□□ 0.36
Ctr9Q62018 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Ctr9Q62018 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.32■□□□□ 0.36
Ctr9Q62018 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.32■□□□□ 0.36
Ctr9Q62018 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ctr9Q62018 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.32■□□□□ 0.36
Ctr9Q62018 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctr9Q62018 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ctr9Q62018 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Ctr9Q62018 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ctr9Q62018 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Ctr9Q62018 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctr9Q62018 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctr9Q62018 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ctr9Q62018 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctr9Q62018 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctr9Q62018 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ctr9Q62018 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.31■□□□□ 0.36
Ctr9Q62018 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.31■□□□□ 0.36
Ctr9Q62018 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ctr9Q62018 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.31■□□□□ 0.36
Ctr9Q62018 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.31■□□□□ 0.36
Ctr9Q62018 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctr9Q62018 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctr9Q62018 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ctr9Q62018 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctr9Q62018 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Ctr9Q62018 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctr9Q62018 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctr9Q62018 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctr9Q62018 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ctr9Q62018 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ctr9Q62018 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctr9Q62018 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctr9Q62018 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ctr9Q62018 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctr9Q62018 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ctr9Q62018 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ctr9Q62018 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ctr9Q62018 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.3■□□□□ 0.36
Ctr9Q62018 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctr9Q62018 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ctr9Q62018 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.3■□□□□ 0.36
Ctr9Q62018 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ctr9Q62018 Gm15693-201ENSMUST00000120470 637 ntBASIC17.3■□□□□ 0.36
Ctr9Q62018 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ctr9Q62018 AA543401-201ENSMUST00000164248 1269 ntBASIC17.3■□□□□ 0.36
Ctr9Q62018 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.3■□□□□ 0.36
Ctr9Q62018 Gm9824-201ENSMUST00000178707 561 ntBASIC17.3■□□□□ 0.36
Ctr9Q62018 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms