Protein–RNA interactions for Protein: Q61488

Dhh, Desert hedgehog protein, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhhQ61488 Gm12892-201ENSMUST00000117367 1146 ntBASIC12.91□□□□□ -0.34
DhhQ61488 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.91□□□□□ -0.34
DhhQ61488 Gm11025-201ENSMUST00000140773 466 ntBASIC12.91□□□□□ -0.34
DhhQ61488 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.91□□□□□ -0.34
DhhQ61488 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
DhhQ61488 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DhhQ61488 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DhhQ61488 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DhhQ61488 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DhhQ61488 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DhhQ61488 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
DhhQ61488 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DhhQ61488 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DhhQ61488 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.91□□□□□ -0.34
DhhQ61488 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DhhQ61488 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.91□□□□□ -0.34
DhhQ61488 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
DhhQ61488 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DhhQ61488 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
DhhQ61488 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
DhhQ61488 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DhhQ61488 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
DhhQ61488 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
DhhQ61488 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
DhhQ61488 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.91□□□□□ -0.34
DhhQ61488 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
DhhQ61488 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
DhhQ61488 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.9□□□□□ -0.34
DhhQ61488 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
DhhQ61488 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
DhhQ61488 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
DhhQ61488 Gm15427-201ENSMUST00000117288 531 ntBASIC12.9□□□□□ -0.34
DhhQ61488 Gm13464-201ENSMUST00000119418 935 ntBASIC12.9□□□□□ -0.34
DhhQ61488 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.9□□□□□ -0.34
DhhQ61488 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.9□□□□□ -0.34
DhhQ61488 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
DhhQ61488 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
DhhQ61488 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
DhhQ61488 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
DhhQ61488 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
DhhQ61488 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
DhhQ61488 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
DhhQ61488 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
DhhQ61488 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.9□□□□□ -0.35
DhhQ61488 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
DhhQ61488 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
DhhQ61488 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DhhQ61488 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
DhhQ61488 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DhhQ61488 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
DhhQ61488 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
DhhQ61488 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.89□□□□□ -0.35
DhhQ61488 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
DhhQ61488 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DhhQ61488 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DhhQ61488 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DhhQ61488 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.89□□□□□ -0.35
DhhQ61488 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.89□□□□□ -0.35
DhhQ61488 Gm8749-201ENSMUST00000117737 331 ntBASIC12.89□□□□□ -0.35
DhhQ61488 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.89□□□□□ -0.35
DhhQ61488 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.89□□□□□ -0.35
DhhQ61488 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.89□□□□□ -0.35
DhhQ61488 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.89□□□□□ -0.35
DhhQ61488 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.89□□□□□ -0.35
DhhQ61488 Chchd1-203ENSMUST00000224633 557 ntBASIC12.89□□□□□ -0.35
DhhQ61488 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DhhQ61488 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DhhQ61488 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.89□□□□□ -0.35
DhhQ61488 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
DhhQ61488 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
DhhQ61488 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DhhQ61488 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.89□□□□□ -0.35
DhhQ61488 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DhhQ61488 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
DhhQ61488 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
DhhQ61488 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DhhQ61488 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
DhhQ61488 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
DhhQ61488 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms