Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm34391-201ENSMUST00000203706 907 ntBASIC16.28■□□□□ 0.2
Ift88Q61371 Gm45167-201ENSMUST00000208007 322 ntBASIC16.28■□□□□ 0.2
Ift88Q61371 Gm6376-201ENSMUST00000209407 580 ntBASIC16.28■□□□□ 0.2
Ift88Q61371 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Ift88Q61371 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ift88Q61371 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ift88Q61371 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ift88Q61371 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ift88Q61371 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ift88Q61371 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ift88Q61371 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ift88Q61371 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ift88Q61371 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ift88Q61371 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Ift88Q61371 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.27■□□□□ 0.2
Ift88Q61371 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Ift88Q61371 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ift88Q61371 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ift88Q61371 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.27■□□□□ 0.2
Ift88Q61371 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ift88Q61371 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ift88Q61371 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ift88Q61371 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.27■□□□□ 0.2
Ift88Q61371 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ift88Q61371 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.27■□□□□ 0.2
Ift88Q61371 Gm27459-201ENSMUST00000184860 107 ntBASIC16.27■□□□□ 0.2
Ift88Q61371 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ift88Q61371 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.27■□□□□ 0.2
Ift88Q61371 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ift88Q61371 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ift88Q61371 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ift88Q61371 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ift88Q61371 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ift88Q61371 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Ift88Q61371 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ift88Q61371 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Ift88Q61371 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Ift88Q61371 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ift88Q61371 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ift88Q61371 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ift88Q61371 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ift88Q61371 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.27■□□□□ 0.19
Ift88Q61371 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ift88Q61371 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Ift88Q61371 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ift88Q61371 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ift88Q61371 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.26■□□□□ 0.19
Ift88Q61371 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.26■□□□□ 0.19
Ift88Q61371 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ift88Q61371 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Gm7230-201ENSMUST00000173026 815 ntBASIC16.26■□□□□ 0.19
Ift88Q61371 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.26■□□□□ 0.19
Ift88Q61371 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
Ift88Q61371 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ift88Q61371 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.25■□□□□ 0.19
Ift88Q61371 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ift88Q61371 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms