Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mre11Q61216 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mre11Q61216 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Mre11Q61216 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.62■□□□□ 0.41
Mre11Q61216 Mir5130-201ENSMUST00000175160 84 ntBASIC17.62■□□□□ 0.41
Mre11Q61216 Gm27389-201ENSMUST00000183622 195 ntBASIC17.62■□□□□ 0.41
Mre11Q61216 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.62■□□□□ 0.41
Mre11Q61216 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mre11Q61216 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mre11Q61216 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.62■□□□□ 0.41
Mre11Q61216 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mre11Q61216 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Mre11Q61216 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mre11Q61216 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Mre11Q61216 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mre11Q61216 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mre11Q61216 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mre11Q61216 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Mre11Q61216 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mre11Q61216 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mre11Q61216 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mre11Q61216 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mre11Q61216 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Mre11Q61216 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Mre11Q61216 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mre11Q61216 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.61■□□□□ 0.41
Mre11Q61216 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mre11Q61216 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Mre11Q61216 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mre11Q61216 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mre11Q61216 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mre11Q61216 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mre11Q61216 Gm6433-201ENSMUST00000118634 875 ntBASIC17.61■□□□□ 0.41
Mre11Q61216 Gm11355-201ENSMUST00000121120 306 ntBASIC17.61■□□□□ 0.41
Mre11Q61216 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mre11Q61216 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.61■□□□□ 0.41
Mre11Q61216 Gm7889-201ENSMUST00000185591 958 ntBASIC17.61■□□□□ 0.41
Mre11Q61216 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.61■□□□□ 0.41
Mre11Q61216 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mre11Q61216 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mre11Q61216 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mre11Q61216 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Mre11Q61216 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mre11Q61216 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mre11Q61216 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mre11Q61216 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Mre11Q61216 Acot6-202ENSMUST00000222921 3622 ntBASIC17.61■□□□□ 0.41
Mre11Q61216 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mre11Q61216 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mre11Q61216 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Mre11Q61216 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Mre11Q61216 Gm12626-201ENSMUST00000117339 1983 ntBASIC17.6■□□□□ 0.41
Mre11Q61216 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.6■□□□□ 0.41
Mre11Q61216 Gm42928-201ENSMUST00000197338 3339 ntBASIC17.6■□□□□ 0.41
Mre11Q61216 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mre11Q61216 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Mre11Q61216 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mre11Q61216 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mre11Q61216 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mre11Q61216 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mre11Q61216 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Mre11Q61216 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Mre11Q61216 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.6■□□□□ 0.41
Mre11Q61216 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mre11Q61216 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.6■□□□□ 0.41
Mre11Q61216 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mre11Q61216 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mre11Q61216 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mre11Q61216 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mre11Q61216 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Mre11Q61216 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.59■□□□□ 0.41
Mre11Q61216 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Mre11Q61216 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Mre11Q61216 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Mre11Q61216 Gm8344-201ENSMUST00000119813 856 ntBASIC17.59■□□□□ 0.41
Mre11Q61216 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.59■□□□□ 0.41
Mre11Q61216 Gm21559-201ENSMUST00000220638 855 ntBASIC17.59■□□□□ 0.41
Mre11Q61216 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.59■□□□□ 0.41
Mre11Q61216 Gm8587-201ENSMUST00000076538 843 ntBASIC17.59■□□□□ 0.41
Mre11Q61216 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Mre11Q61216 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Mre11Q61216 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms