Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm38002-201ENSMUST00000193255 180 ntBASIC14.27□□□□□ -0.13
Col12a1Q60847 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.27□□□□□ -0.13
Col12a1Q60847 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.27□□□□□ -0.13
Col12a1Q60847 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Col12a1Q60847 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col12a1Q60847 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC14.27□□□□□ -0.13
Col12a1Q60847 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.27□□□□□ -0.13
Col12a1Q60847 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col12a1Q60847 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col12a1Q60847 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col12a1Q60847 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col12a1Q60847 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col12a1Q60847 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Col12a1Q60847 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.26□□□□□ -0.13
Col12a1Q60847 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.26□□□□□ -0.13
Col12a1Q60847 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col12a1Q60847 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col12a1Q60847 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col12a1Q60847 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col12a1Q60847 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col12a1Q60847 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col12a1Q60847 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Col12a1Q60847 Gm15460-201ENSMUST00000118147 391 ntBASIC14.26□□□□□ -0.13
Col12a1Q60847 Gm10156-201ENSMUST00000122364 462 ntBASIC14.26□□□□□ -0.13
Col12a1Q60847 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.26□□□□□ -0.13
Col12a1Q60847 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col12a1Q60847 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Col12a1Q60847 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col12a1Q60847 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col12a1Q60847 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col12a1Q60847 Gm15240-201ENSMUST00000118156 720 ntBASIC14.26□□□□□ -0.13
Col12a1Q60847 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col12a1Q60847 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.26□□□□□ -0.13
Col12a1Q60847 Gm7593-201ENSMUST00000187246 644 ntBASIC14.26□□□□□ -0.13
Col12a1Q60847 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.26□□□□□ -0.13
Col12a1Q60847 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.26□□□□□ -0.13
Col12a1Q60847 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.26□□□□□ -0.13
Col12a1Q60847 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col12a1Q60847 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Col12a1Q60847 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col12a1Q60847 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col12a1Q60847 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.25□□□□□ -0.13
Col12a1Q60847 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
Col12a1Q60847 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col12a1Q60847 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col12a1Q60847 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.25□□□□□ -0.13
Col12a1Q60847 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.25□□□□□ -0.13
Col12a1Q60847 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.25□□□□□ -0.13
Col12a1Q60847 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.25□□□□□ -0.13
Col12a1Q60847 Gm17795-201ENSMUST00000214505 757 ntBASIC14.25□□□□□ -0.13
Col12a1Q60847 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.25□□□□□ -0.13
Col12a1Q60847 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col12a1Q60847 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col12a1Q60847 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.24□□□□□ -0.13
Col12a1Q60847 B9d1os-201ENSMUST00000137010 674 ntBASIC14.24□□□□□ -0.13
Col12a1Q60847 Mir7032-201ENSMUST00000185154 79 ntBASIC14.24□□□□□ -0.13
Col12a1Q60847 Nsd1-205ENSMUST00000224693 852 ntBASIC14.24□□□□□ -0.13
Col12a1Q60847 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col12a1Q60847 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.24□□□□□ -0.13
Col12a1Q60847 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.24□□□□□ -0.13
Col12a1Q60847 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.24□□□□□ -0.13
Col12a1Q60847 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col12a1Q60847 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms