Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-2Q5R1I4 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Gm27631-201ENSMUST00000184163 466 ntBASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-2Q5R1I4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Asic1-205ENSMUST00000228185 1818 ntBASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Gm16476-201ENSMUST00000221544 139 ntBASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Dupd1-202ENSMUST00000224735 548 ntBASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-2Q5R1I4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.85□□□□□ -0.35
Trav6-2Q5R1I4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms