Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Gm18206-201ENSMUST00000207027 926 ntBASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Gm45747-201ENSMUST00000212203 999 ntBASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf20Q5DTM8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Mir8117-201ENSMUST00000184773 107 ntBASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf20Q5DTM8 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Gm12260-201ENSMUST00000122447 411 ntBASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Gm23547-201ENSMUST00000158210 271 ntBASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Gm17968-201ENSMUST00000194902 784 ntBASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.47■□□□□ 0.39
Rnf20Q5DTM8 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf20Q5DTM8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms