Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn4Q3UWL8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn4Q3UWL8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.42□□□□□ -0.1
Pfdn4Q3UWL8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn4Q3UWL8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn4Q3UWL8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn4Q3UWL8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn4Q3UWL8 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Pfdn4Q3UWL8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn4Q3UWL8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn4Q3UWL8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Pfdn4Q3UWL8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.42□□□□□ -0.1
Pfdn4Q3UWL8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn4Q3UWL8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn4Q3UWL8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn4Q3UWL8 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Pfdn4Q3UWL8 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Pfdn4Q3UWL8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Gm18489-201ENSMUST00000172565 551 ntBASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Gm6296-201ENSMUST00000222599 943 ntBASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Pfdn4Q3UWL8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.4□□□□□ -0.1
Pfdn4Q3UWL8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Gm27646-201ENSMUST00000183989 110 ntBASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pfdn4Q3UWL8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms