Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.68□□□□□ -0.06
Fam196aQ3USH1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Fam196aQ3USH1 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Gm15460-201ENSMUST00000118147 391 ntBASIC14.66□□□□□ -0.06
Fam196aQ3USH1 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Gm5279-201ENSMUST00000199575 745 ntBASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Fam196aQ3USH1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fam196aQ3USH1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fam196aQ3USH1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Fam196aQ3USH1 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.65□□□□□ -0.06
Fam196aQ3USH1 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fam196aQ3USH1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fam196aQ3USH1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fam196aQ3USH1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Fam196aQ3USH1 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fam196aQ3USH1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Fam196aQ3USH1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Fam196aQ3USH1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Fam196aQ3USH1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms