Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Arhgef40Q3UPH7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC21.29■■□□□ 1
Arhgef40Q3UPH7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Arhgef40Q3UPH7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC21.29■■□□□ 1
Arhgef40Q3UPH7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC21.29■■□□□ 1
Arhgef40Q3UPH7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC21.29■■□□□ 1
Arhgef40Q3UPH7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Arhgef40Q3UPH7 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC21.29■■□□□ 1
Arhgef40Q3UPH7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Arhgef40Q3UPH7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Arhgef40Q3UPH7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Arhgef40Q3UPH7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Arhgef40Q3UPH7 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC21.29■■□□□ 1
Arhgef40Q3UPH7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Arhgef40Q3UPH7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Arhgef40Q3UPH7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC21.29■■□□□ 1
Arhgef40Q3UPH7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Arhgef40Q3UPH7 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Arhgef40Q3UPH7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC21.28■■□□□ 1
Arhgef40Q3UPH7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Arhgef40Q3UPH7 Gm12742-201ENSMUST00000117326 410 ntBASIC21.28■■□□□ 1
Arhgef40Q3UPH7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Arhgef40Q3UPH7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC21.28■■□□□ 1
Arhgef40Q3UPH7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Arhgef40Q3UPH7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Gm13392-201ENSMUST00000117708 150 ntBASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC21.27■■□□□ 1
Arhgef40Q3UPH7 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Arhgef40Q3UPH7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.27■□□□□ 0.99
Arhgef40Q3UPH7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Arhgef40Q3UPH7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Arhgef40Q3UPH7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Arhgef40Q3UPH7 Gm15376-201ENSMUST00000122258 783 ntBASIC21.25■□□□□ 0.99
Arhgef40Q3UPH7 Gm8062-201ENSMUST00000139696 444 ntBASIC21.25■□□□□ 0.99
Arhgef40Q3UPH7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Arhgef40Q3UPH7 Gm37714-201ENSMUST00000194742 342 ntBASIC21.25■□□□□ 0.99
Arhgef40Q3UPH7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Arhgef40Q3UPH7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Arhgef40Q3UPH7 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Arhgef40Q3UPH7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Arhgef40Q3UPH7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Arhgef40Q3UPH7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Arhgef40Q3UPH7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Arhgef40Q3UPH7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Gm7446-201ENSMUST00000221035 1240 ntBASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Arhgef40Q3UPH7 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms