Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc4Q08624 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.08□□□□□ -0.16
Hoxc4Q08624 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.07□□□□□ -0.16
Hoxc4Q08624 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.07□□□□□ -0.16
Hoxc4Q08624 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.07□□□□□ -0.16
Hoxc4Q08624 Gm14719-201ENSMUST00000121891 340 ntBASIC14.07□□□□□ -0.16
Hoxc4Q08624 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Gm3436-201ENSMUST00000179930 840 ntBASIC14.07□□□□□ -0.16
Hoxc4Q08624 Gm46209-201ENSMUST00000217912 553 ntBASIC14.07□□□□□ -0.16
Hoxc4Q08624 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Hoxc4Q08624 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Hoxc4Q08624 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Hoxc4Q08624 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.06□□□□□ -0.16
Hoxc4Q08624 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc4Q08624 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.05□□□□□ -0.16
Hoxc4Q08624 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc4Q08624 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms