Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.24□□□□□ -0.45
Tff1Q08423 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.24□□□□□ -0.45
Tff1Q08423 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Tff1Q08423 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.24□□□□□ -0.45
Tff1Q08423 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Tff1Q08423 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.24□□□□□ -0.45
Tff1Q08423 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Tff1Q08423 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.24□□□□□ -0.45
Tff1Q08423 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Tff1Q08423 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.24□□□□□ -0.45
Tff1Q08423 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Tff1Q08423 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Tff1Q08423 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Tff1Q08423 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Tff1Q08423 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.24□□□□□ -0.45
Tff1Q08423 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Tff1Q08423 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Tff1Q08423 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Tff1Q08423 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Tff1Q08423 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.23□□□□□ -0.45
Tff1Q08423 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.23□□□□□ -0.45
Tff1Q08423 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Tff1Q08423 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Gm12134-201ENSMUST00000122109 520 ntBASIC12.23□□□□□ -0.45
Tff1Q08423 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Tff1Q08423 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC12.23□□□□□ -0.45
Tff1Q08423 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.23□□□□□ -0.45
Tff1Q08423 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.23□□□□□ -0.45
Tff1Q08423 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.23□□□□□ -0.45
Tff1Q08423 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.23□□□□□ -0.45
Tff1Q08423 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.23□□□□□ -0.45
Tff1Q08423 AV026068-213ENSMUST00000223675 1171 ntBASIC12.23□□□□□ -0.45
Tff1Q08423 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.23□□□□□ -0.45
Tff1Q08423 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.23□□□□□ -0.45
Tff1Q08423 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.23□□□□□ -0.45
Tff1Q08423 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tff1Q08423 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Tff1Q08423 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tff1Q08423 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms