Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.54□□□□□ -0.24
Cacna1aP97445 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1aP97445 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.54□□□□□ -0.24
Cacna1aP97445 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1aP97445 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1aP97445 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1aP97445 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Cacna1aP97445 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1aP97445 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Cacna1aP97445 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.54□□□□□ -0.24
Cacna1aP97445 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.54□□□□□ -0.24
Cacna1aP97445 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.54□□□□□ -0.24
Cacna1aP97445 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1aP97445 Gm8062-201ENSMUST00000139696 444 ntBASIC13.54□□□□□ -0.24
Cacna1aP97445 Gm45841-201ENSMUST00000207700 164 ntBASIC13.54□□□□□ -0.24
Cacna1aP97445 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1aP97445 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1aP97445 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cacna1aP97445 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1aP97445 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cacna1aP97445 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1aP97445 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1aP97445 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cacna1aP97445 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cacna1aP97445 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Cacna1aP97445 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cacna1aP97445 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.53□□□□□ -0.24
Cacna1aP97445 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cacna1aP97445 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.53□□□□□ -0.24
Cacna1aP97445 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.53□□□□□ -0.24
Cacna1aP97445 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Mir1982-201ENSMUST00000157368 74 ntBASIC13.53□□□□□ -0.24
Cacna1aP97445 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.53□□□□□ -0.24
Cacna1aP97445 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.53□□□□□ -0.24
Cacna1aP97445 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.53□□□□□ -0.24
Cacna1aP97445 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cacna1aP97445 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.53□□□□□ -0.24
Cacna1aP97445 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cacna1aP97445 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cacna1aP97445 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cacna1aP97445 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cacna1aP97445 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.52□□□□□ -0.24
Cacna1aP97445 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cacna1aP97445 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cacna1aP97445 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1aP97445 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Cacna1aP97445 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1aP97445 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1aP97445 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.52□□□□□ -0.25
Cacna1aP97445 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1aP97445 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1aP97445 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cacna1aP97445 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.52□□□□□ -0.25
Cacna1aP97445 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1aP97445 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.52□□□□□ -0.25
Cacna1aP97445 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1aP97445 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1aP97445 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.52□□□□□ -0.25
Cacna1aP97445 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1aP97445 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.52□□□□□ -0.25
Cacna1aP97445 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1aP97445 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.52□□□□□ -0.25
Cacna1aP97445 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1aP97445 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Cacna1aP97445 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.52□□□□□ -0.25
Cacna1aP97445 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.52□□□□□ -0.25
Cacna1aP97445 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cacna1aP97445 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Cacna1aP97445 Olfr582-201ENSMUST00000098212 960 ntBASIC13.52□□□□□ -0.25
Cacna1aP97445 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1aP97445 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1aP97445 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1aP97445 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1aP97445 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cacna1aP97445 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms