Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ybx1P62960 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
Ybx1P62960 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ybx1P62960 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ybx1P62960 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ybx1P62960 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ybx1P62960 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.02■□□□□ -0
Ybx1P62960 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ybx1P62960 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ybx1P62960 Gm14928-201ENSMUST00000120198 477 ntBASIC15.02■□□□□ -0
Ybx1P62960 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ybx1P62960 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.02■□□□□ -0
Ybx1P62960 Gm24694-201ENSMUST00000180054 110 ntBASIC15.02■□□□□ -0
Ybx1P62960 Gm27663-201ENSMUST00000184839 110 ntBASIC15.02■□□□□ -0
Ybx1P62960 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ybx1P62960 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ybx1P62960 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.02■□□□□ -0
Ybx1P62960 Gm43703-201ENSMUST00000200523 763 ntBASIC15.02■□□□□ -0
Ybx1P62960 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.02■□□□□ -0
Ybx1P62960 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ybx1P62960 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ybx1P62960 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ybx1P62960 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ybx1P62960 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ybx1P62960 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Ybx1P62960 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ybx1P62960 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ybx1P62960 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.02□□□□□ -0.01
Ybx1P62960 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ybx1P62960 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ybx1P62960 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ybx1P62960 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ybx1P62960 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.01□□□□□ -0.01
Ybx1P62960 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ybx1P62960 Gm4875-201ENSMUST00000118257 786 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.01□□□□□ -0.01
Ybx1P62960 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.01□□□□□ -0.01
Ybx1P62960 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ybx1P62960 Gm29310-201ENSMUST00000185468 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm21825-201ENSMUST00000185728 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm29109-201ENSMUST00000185895 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm21896-201ENSMUST00000186520 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm21873-201ENSMUST00000186728 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm21794-201ENSMUST00000187056 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm21880-201ENSMUST00000187275 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm21826-201ENSMUST00000187451 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm21198-201ENSMUST00000188393 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm21749-201ENSMUST00000189343 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm21901-201ENSMUST00000189568 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm29424-201ENSMUST00000189716 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm28599-201ENSMUST00000189838 694 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm21867-201ENSMUST00000189917 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm29269-201ENSMUST00000190087 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm21722-201ENSMUST00000190153 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm28423-201ENSMUST00000190701 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm21899-201ENSMUST00000190745 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm21910-201ENSMUST00000191163 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm21849-201ENSMUST00000191571 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm28678-201ENSMUST00000191593 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm20910-201ENSMUST00000193268 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm21871-201ENSMUST00000194621 696 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Gm9794-201ENSMUST00000202370 423 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.01□□□□□ -0.01
Ybx1P62960 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.01□□□□□ -0.01
Ybx1P62960 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ybx1P62960 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.01□□□□□ -0.01
Ybx1P62960 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ybx1P62960 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.01□□□□□ -0.01
Ybx1P62960 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ybx1P62960 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ybx1P62960 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ybx1P62960 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ybx1P62960 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ybx1P62960 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ybx1P62960 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ybx1P62960 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15□□□□□ -0.01
Ybx1P62960 Gm12859-201ENSMUST00000117834 427 ntBASIC15□□□□□ -0.01
Ybx1P62960 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15□□□□□ -0.01
Ybx1P62960 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms